liana.method.build_prior_network¶

liana.method.build_prior_network(ppis, input_nodes, output_nodes, lr_sep=None, verbose=False)¶

Build Prior Network from PPIs and input/output nodes.

Parameters:

ppislist of tuples or pandas DataFrame: The PPIs to use for the prior network. If a pandas DataFrame is provided, it must have the columns
input_nodesdict: A dictionary of input nodes. The keys are the node names, the values are the node scores.
output_nodesdict: A dictionary of output nodes. The keys are the node names, the values are the node scores.
lr_sepstr, optional: The separator to use to split the input nodes into ligand and receptor. If None, the input nodes will be used as is.
verbosebool, optional: Whether to print progress information. Default: True

Returns: